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  Malaria and Other Parasitic Diseases

focus on  Malaria,  Leishmania  and  Filaria

 

Achievements
  Drugs commercialized
(a) Blood schizontocidal antimalarial E-Mal (licenced to Themis India Ltd. since 1997) is a fast acting, semi-synthetic artemisinin derivative effective against drug resistant and cerebral malaria cases. Post marketing surveillance shows quick and sustained recovery of comatose cerebral malaria cases and prevention of high mortality.
(b) Elubaquine an anti-relapse antimalarial has been licenced to Nicholas Piramal India Ltd. since 2000 for treatment of relapses in P.vivax patients. Elubaquine an analog of primaquine produces 3 to 4 times lower methemoglobin toxicity thus providing an improved therapeutic index over primaquine
Candidate drugs under development
Compound CDRI 97/78, a fully synthetic 1,2,4 trioxane derivative has been identified for development as a viable alternative to artemisinine derivatives for use against drug resistant P. falciparum and cerebral malaria cases. The compound has successfully completed preclinical efficacy and regulatory tests and Phase I clinical trials are in progress
Another antimalarial trioxane compound CDRI 99/411 with increased half life to allow for extended exposure after oral dosage has also completed preclinical efficacy and regulatory studies.
...................


...............................................CDRI 97/78    ............................................................................. CDRI 99/411
Clinical development of both the above compounds is being pursued under Licensing agreements with IPCA Pharmaceuticals Ltd., Mumbai.
 
 
BASIC RESEARCH
Experimental models
Modification of culture media constituents enabling the use of Bovine serum in lieu of scarcely available Human serum for in vitro studies employing Plasmodium falciparum parasites.

An experimental arteether resistant rodent malaria model was established as a tool to study mechanism of resistance.
Reporter gene based in vitro screening assays employing GFP and Luciferase transfected L. donovani parasites established.

 
Pathway and drug target identification

Targeting of nuclear-encoded gyrase to the P. falciparum apicoplast was established. Interaction of a coumerin drug with PfgyrB and inhibition of apicoplast DNA replication was demonstrated. Specific anti-parasitic effect of inhibition of P. falciparum transketolase identified the enzyme as a drug target.

B. malayi hexokinase, trehalose 6-phosphate synthase, independent phosphoglycerate mutase and RNA helicase (Fig. below) characterized as putative drug targets against filaria.

Three dimensional structure of BmL3-Helicase

Leishmania drug targets such as Pteridine reductase, trypanothione reductase, dipetidyl carboxypeptidase squalene synthase, Hexokinase, Enolase, Aldolase and Nucleoside diPhosphate Kinase b (NDKb) investigated.

Biochemical and molecular mechanism of drug resistance studied in Leishmania; proteins/genes identified in SAG resistant clinical isolates.
DEAD box RNA Helicase gene (BmL3-Helicase) of B. malayi cloned, expressed, characterized and validated by siRNA.
B. malayi hexokinase (BmHK) cloned, expressed and kinetic properties studied, 3D model constructed.
 
Molecular and cell biology

Mechanism of DNA replication and ori activation of the P. falciparum apicoplast was established.

Investigation of apicoplast targeting and DNA condensation properties of PfHU established the protein as the major DNA organization protein of the apicoplast genome.

The role of actin and actin-related proteins in Leishmania biology was established. The role of coronin in regulation of microtubule dynamics during cytokinesis (Fig. below) and of ADF/cofilin in actin-dynamics and flagellar assembly in Leishmania was demonstrated.

 

Identification and Validation of Vaccine Targets for their Prophylactic Potential against Leishmania and Filaria

 

Identification and Validation of Vaccine Targets for their Prophylactic Potential against Leishmania and Filaria
Several Th1 stimulatory Leishmania proteins identified using proteomic approach for their prophylactic potential.

Photodynamic vaccination of hamsters with inducible suicidal mutants of Leishmania amazonensis elicited T cell-transferable immunity against L. donovani infection in hamsters.

Immunization with the DNA Encoding N-terminal domain of Proteophosphoglycan 3 of Leishmania donovani generated Th-1 type immuno-protective response against experimental Visceral Leishmaniasis.

Recombinant heavy chain myosin of B. malayi induced significant protection against infective larval challenge in rodents through induction of mixed Th1/Th2 immune response.

Mitochondrial fraction (MT) of adult B. malayi contained proinflammatory molecules which evoked a protective Th1 type of immune response and the protection was localized in the BMT-5 sub fraction.

 
Host-pathogen interaction

Pro-inflammatory molecules of B. malayi were identified, purified and characterized; their role in host-parasite interactions established.

The alterations in B. malayi proteome pattern following Wolbachia depletion after tetracycline treatment established; proteins with altered expression were analyzed. 

 
Recent Publications

Malaria

Raghu Ram EVS, Rangeetha Naik, Munia Ganguli and Habib S (2008) DNA organization by the apicoplast-targeted bacterial histone-like protein of Plasmodium falciparum. Nucleic Acids Research 36:5061-5073.

Sinha S, Jha GN, Anand P, Qidwai T, Pati SS, Mohanty S, Mishra SK, Tyagi PK, Sharma SK, Venkatesh V, Habib S (2009). CR1 levels and gene polymorphisms exhibit differential association with falciparum malaria in regions of varying disease endemicity. Human Immunology 70: 244-250.

Kumar, S., Guha, M., Choubey,V., Maity,P., Srivastava, K., Puri, S.K. and Bandyopadhyay, U. (2008) Bilirubin inhibits Plasmodium falciparum growth through the generation of reactive oxygen species. Free Radic Biol Med. 44, 602-613

Madapa S, Tusi Z, Mishra A, Srivastava K, Pandey SK, Tripathi R, Puri SK, Batra S.(2009) Search for new pharmacophores for antimalarial activity. Part II: synthesis and antimalarial activity of new 6-ureido-4- anilinoquinazolines. Bioorg Med Chem, 17(1):222-34,

Sharma M, Chaturvedi V, Manju YK, Bhatnagar S, Srivastava K, Puri SK, Chauhan, PMS. (2009) Substituted quinolinyl chalcones and quinolinyl pyrimidines as a new class of anti-infective agents. Eur J Med Chem. 44(5):2081-91.

Singh, C., Verma, V.P, Naikade, NK, Singh, A S, Hassam, M and Puri, SK (2008) Novel Bis- and Tris-1,2,4 trioxanes: Synthesis and antimalarial activity against multi drug resistant P. yoelii in Swiss mice. J. Med Chem., 51: 7581-92

Dwivedi V, Vasco A, Vedi S, Dangi A, Khan A, Bhattacharya S M and Owais M (2009) Adjuvanticity and protective immunity of Plasmodium yoelii nigeriensis blood-stage soluble antigens encapsulated in fusogenic liposome. Vaccine 27: 473–482.

Joshi S, Singh AR, Kumar A, Misra PC, Siddiqi MI and Saxena JK - Molecular cloning and characterization of Plasmodium falciparum transketolase (2008) - Mol Biochem Parasitol. 160, 32-41

Filaria

Dangi A, Vedi S, Nag JK, Pathinkar S, Singh MP, Kar SK, Dube A, Bhattacharya SM (2009) Tetracycline treatment targeting Wolbachia affects expression of an array of proteins in Brugia malayi parasite. Proteomics 9: 4192–4208.
Sahoo MK, Sisodia BS, Dixit S, Joseph SK, Gaur RL, Verma SK, Verma AK, Shasany AK, Dowle AA, Murthy PK (2009). Immunization with inflammatory proteome of Brugia malayi adult worm induces a Th1/Th2-immune response and confers protection against the filarial infection. Vaccine Jul 9; 27(32):4263-71.
Vedi S, Dangi A, Hajela K and Misra-Bhattacharya S (2008) Vaccination with 73 kDa recombinant heavy chain myosin generates high level of protection against Brugia malayi challenge in jird and mastomys models. Vaccine 26(47) 26: 5997-6005.
Singh BK, Mishra M, Saxena N, Yadav GP, Maulik PR, Sahoo MK, Gaur RL, Murthy PK, Tripathi RP (2008) Synthesis of 2-sulfanyl-6-methyl-1,4-dihydropyrimidines as a new class of antifilarial agents. Eur J Med Chem. 43(12):2717-23.
Singh AR, Joshi S, Arya R, Kayastha AM, Saxena JK (2009) Guanidine hydrochloride and urea induced unfolding of Brugia malayi hexokinase. Euro Biophysics J. Sep 15. [Epub ahead of print]
Meghna Singh, Shilpy sakya, Vishal Kumar Soni, Anil Dangi, Nikhil Kumar and S M Bhattacharya (2009) The n-hexane and chloroform fractions of Piper betle L. trigger different arms of immune responses in BALB/c mice and exhibit antifilarial activity against human lymphatic filariid Brugia malayi.. Intern. Immunopharmacol. 6: 716-728.
Shakya S, Singh PK, Kushwaha S and Bhattacharya SM (2009) Adult Brugia malayi ~34kDa (BMT-5) antigen offers Th1 mediated significant protection against infective larval challenge in Mastomys coucha. Parasitol Internat. 58(4): 346-35.
Singh AR, Joshi S, Arya R, Kayastha AM, Srivastava KK, Tripathi LM, Saxena JK (2008) Molecular cloning and characterization of Brugia malayi hexokinase. Parasitol Int. 57(3):354-61.
Kaushal, N. A., Srivastava, N., Mustafa, H., Tandon, A., Singh, S. K. and Kaushal, D. C. (2009). Isolation of an antigen fraction from Setaria cervi adults having potential for immunodiagnosis of human filariasis. Immunol Invest 38 (8):749-61.
Murthy PK, Dixit S, Gaur RL, Kumar R, Sahoo MK, Shakya N, Joseph SK, Palne S, Gupta S (2008) Influence of Brugia malayi life stages and BmAFII fraction on experimental Leishmania donovani infection in hamsters. Acta Trop. 106(2):81-9.
Gaur RL, Sahoo MK, Dixit S, Fatma N, Rastogi S, Kulshreshtha DK, Chatterjee RK,
Murthy PK (2008).Antifilarial activity of Caesalpinia bonducella against experimental filarial infections. Indian J Med Res. 128(1):65-70.
Leishmania
TV Tammana, AA Sahasrabuddhe, K Mitra, VK Bajpai, CMGupta (2008) Actin-depolymerizing factor, ADF/cofilin, is essentially required in assembly of Leishmania flagellum. Mol. Microbiol. 70(4):837-52.
AA. Sahasrabuddhe, RC. Nayak, CM. Gupta (2009) Ancient Leishmania coronin (CRN12) is involved in microtubule remodeling during cytokinesis J. Cell Sci.122:1691.
R Kumar, S Gupta, R Srivastava, AA Sahasrabuddhe, CM Gupta (2009). Expression of a PTS2truncated hexokinase produces glucose toxicity in Leishmania donovani. Mol Biochem Parasitol. 2009 Nov 16 ( in press)
SS Katta, AA Sahasrabuddhe, CM Gupta. (2009). Flagellar localization of a novel isoform of myosin, myosin XXI, in Leishmania. Mol Biochem Parasitol. 164:105-10.
P Kapoor, AA Sahasrabuddhe, A Kumar, K Mitra, MI Siddiqi, CM. Gupta (2008) An unconventional form of actin in protozoan hemoflagellate, Leishmania. J Biol Chem. 283:22760-73
S Kumari, M Samant, P Khare, P Misra, S Dutta, BK Kolli, S Sharma, KP Chang, A Dube (2009). Photodynamic vaccination of hamsters with inducible suicidal mutants of Leishmania amazonensis elicits T cell-transferable immunity against visceral leishmaniasis. Euro J Immunol 39:178-91.
PP Pathak, SV Pulavarti, A Jain, AA Sahasrabuddhe, CM Gupta, A.Arora (2009) NMR assignment of actin depolymerizing and dynamics regulatory protein from Leishmania donovani. Biomol NMR Assign.3:265-7.
M Samant, R Gupta, S Kumari, P Misra, P Khare, PK Kushawaha, AA Sahasrabuddhe, A Dube (2009). Immunization with the DNA Encoding N terminal domain of Proteophosphoglycan 3 of Leishmania donovani generates Th-1 type immuno-protective response against Experimental Visceral Leishmaniasis, J Immunol 183: 470-9.
N Singh, R Gupta, A Dube (2009). Transgenic Leishmania donovani clinical isolates expressing GFP-constitutively for rapid and reliable ex-vivo drug screening. J Antimicrob Chemother, 64: 370-4.
N Singh, J Kaur, P Kumar, S Gupta, N Singh, A Ghosal, A Dutta, A Kumar, RP Tripathi, MI Siddiqi, C Mandal, A Dube (2009). An orally effective dihydropyrimidone (DHPM) analogue induces apoptosis like cell death in clinical isolates of Leishmania donovani overexpressing pteridine reductase 1. Parasitology Research 105:1317-25.
S Kumari, M Samant, P Misra, P Khare, B Sisodia, AK Shasany, A Dube (2008). Th1-stimulatory polyproteins of soluble Leishmania donovani promastigotes ranging from 89.9 to 97.1kDa offers long-lasting protection against experimental visceral leishmaniasis. Vaccine. 26:5700-11.
S Kumari, M Samant, P Khare, S Sundar, S Sinha, A Dube (2008). Induction of Th1-type cellular responses in cured/exposed Leishmania infected patients and hamsters against poly proteins of soluble Leishmania donovani promastigotes ranging from 89.9-97.1 kDa. Vaccine 26:4813-8.
P Misra, T Khaliq, A Dixit, S Sengupta, M Samant, S Kumari, A Kumar, P Kushawaha, H Majumder, AK Saxena, T Narender, A Dube (2008). Antileishmanial activity mediated by apoptosis and structure based target study of Peganine hydrochloride dihydrate: An approach for rational drug designing. J Antimicrob Chemother 62 :998-1002.
SK Gupta, BS Sisodia, S Sinha, K Hajela, S Naik, AK Shasany, A Dube (2007). Proteomic approach for identification and characterization of novel immunostimulatory proteins from soluble antigens of Leishmania donovani promastigotes. Proteomics 7, 816–823
S Rai, UN Dwivedi, N Goyal (2009). Leishmania donovani trypanothione reductase: role of urea and guanidine hydrochloride in modulation of functional and structural properties. Biochim Biophys Acta. 1794:1474-84
R Vatsyayan, U Roy. (2007). Molecular cloning and biochemical characterization of Leishmania donovani serine hydroxymethyltransferase. Protein Expr Purif. ;52: 433-40
J Kaur, BK Singh, RP Tripathi, P Singh, N Singh. (2009) Leishmania donovani: a glycosyl dihydropyridine analogue induces apoptosis like cell death via targeting pteridine reductase 1 in promastigotes. Exp Parasitol.123:258-64.
P Kumar, A Kumar, SS Verma, N Dwivedi, N Singh, MI Siddiqi, RP Tripathi, A Dube, N Singh (2008). Leishmania donovani pteridine reductase 1: biochemical properties and structure-modeling studies. Exp Parasitol. 120:73-9.
Suryawanshi SN, Chandra Naveen, Kumar Pawan, Porwal Jyoti and Gupta Suman - Chemotherapy of leishmaniasis part-VIII: Synthesis and bioevaluation of novel chalcones (2008) - Eur. J. Med. Chem. 43, 2473-2478
 
 
 
TEAM MEMBERS
 
Area Coordinator: Dr. S. K. Puri
Assistant coordinator: Dr. Saman Habib
Area Leaders : Dr S K Puri ( Malaria)
Dr S Bhattacharya ( Fillriasis)
Dr Anuradha Dube ( Leishmaniasis)
 
Parasite Biology Drug Design and Synthesis
Malaria
Synthetic
Dr S K Puri
Dr A K Saxena
Dr Saman Habib
Dr S B Katti
Dr J K Saxena
Dr B Kundu
Dr Renu Tripathi
Dr P M S Chauhan
Dr Nuzhat A Kaushal
Dr Sanjay Batra
Dr Kumkum Srivastava
Dr R P Tripathi
Dr Raja Kumar Sethu
Dr S N Suryawanshi
Leishmaniasis  
Dr Anuradha Dube Natural Resources/Products
Dr Suman Gupta Dr T. Narendra
Dr Uma Roy
Dr Rakesh Maurya
Dr Neena Goyal Dr K. V. Sashidhara
Dr Neeloo Singh  
  Dr Amogh Sahasrabuddhe Drug Delivery and Kinetics
Filaria   Dr G K Jain
  Dr Shailja Bhattacharya   Dr A K Dwivedi
  Dr P. K. Murthy   Dr Amit Misra
  Dr J K Saxena   Dr Prabhat R Mishra
  Dr Nuzhat A Kaushal
Structure and computational Biology  
  Dr R Ravishankar   Dr J. Venkatesh Pratap
  Dr Ashish Arora   Dr Kalyan Mitra
  Dr Mohammad Imran Siddiqi    
 
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