Dr. SRIKANTA KUMAR RATH
 
 

Scientist E-II
Genotoxicity Laboratory
Toxicology Division
Central Drug Research Institute
Lucknow 226001
 
Educational Qualifications M Sc.(Utkal), Ph.D (BHU)
Date of Birth 02.06.1965
Fax +91-0522-2623405
E-Mail rathsk_2000@yahoo.com,skrath@cdri.res.in
Phone No. +91-0522-2612411-18 Extn. 4600
 
 POST-DOCTORAL RESEARCH
 
Post Doctoral Research: CCMB, Hyderabad, 1995-1998
 
RESEARCH GROUP MEMBERS
Presently Working

Prabhat Singh, Senior Research Fellow, DBT
Sarvendra Vikram Singh, Senior Research Fellow, CSIR
Pratibha Mishra, Senior Research Fellow, ICMR
Ajit Kumar Verma, Senior Research Fellow, CSIR
Juma Ke Ojo, TWAS-CSIR Fellow
Pallavi Srivastava, Project Assistant, CSIR

Past Members

Dr. Ashok Singh, Hormel Fellow, University of Minnesota, USA
Dr. Sanjeev Noel, PDF, Bloomberg School of Public Health, Baltimore, USA
Dr. Amit Kumar Mitra, PDF, University of Minnesota, USA
Shrawan Kumar Mishra, PDF, University of Minnesota, USA
Bipin Chand Misra, Asst Professor, Lovely Professional University,India

 
NOTABLE RECOGNITIONS
 

2007: Raman Research Fellow, CSIR, India
2007-08: Visiting Scientist, Johns Hopkins Bloomberg School of Public
Health, Baltimore, MD, USA
2008 : Genomic Pioneer Award
2009: CSIR Technology Award (team member)

 
CURRENT AREAS OF INTEREST
 

Genotoxicity evaluation of new drug entities: Genotoxicity tests are being performed with new chemical/drug entities to determine and evaluate its health hazards,using standard testing guidelines (e.g. OECD, ICH and Schedule Y).
The Tests included are in vitro chromosomal aberrations experiments in human lymphocytes, in vitro mutagenic experiments in Salmonella typhimurium and

Escherichia coli, in vitro and in vivo micronucleus assay, in vivo chromosomal assay in rodents, in vitro Sister chromatid exchange assays in human lymphocyte and in vivo Sister Chromosomal exchange assays in rodents. The laboratory is also involved in delineating detailed molecular mechanism of candidate drugs and NCEs in different target organs using new models and biomarkers.


Hit map showing differential gene expression

Studying single nucleotide polymorphisms in different genes of drug metabolizing enzymes, DNA repair genes and genes involved in p53 pathway in breast and head and neck cancer patients and their association with the disease in Indian sub-populations is the other focus of the laboratory. In addition to that the lab also explore newer methods for better therapeutic outputs of candidate drugs.

Rflp method for DNA                                     Polymorphism identification and Different SNPs in populations

 
SELECTED PUBLICATIONS
 
Mitra AK, Singh SV, Garg VK, Sharma M, Chaturvedi R and Rath SK(2011)
Protective association exhibited by the single nucleotide polymorphism(SNP) rs 1052133 in the gene human 8 –oxoguanine DNA glycosylase (hOGG1) with the risk of squamous cell Carcinomas of the head and neck (SCCHN) among north Indians. Indian J Med Res 133:605-612
Singh AK, Rath SK, Misra K (2011) Identification of epitopes in Indian human papilloma virus 16 E6: A bioinformatics approach. J Virol Methods. PMID:21699918
Mishra, S, Singh P and Rath SK(2011) A study of toxicity and differential gene expression in murine liver following exposure to anti-malarial drugs: amodiaquine and sulphadoxine-pyrimethamine. Malaria Journal. PMID:21529379
Singh PK, Srivastava A, Singh P, Singh D, Dalela D, Goel M, Gupta S, Negi MPS, Bhatt M, Rath SK (2011) Clinical utility of surviving Gene expression in patients with translational-cell carcinoma of the Urinary Bladder. EJC supplements 9:4-5
Singh P, Mishra P, Verma, AK, Srivastava P, Sharma S and Rath, SK (2011)
The Protective Effect of Apigenin Against Lithocholic Acid-induced Oxidative Stress and Toxicity in Hepatic Cell Lines. ATLA 39: 96
Singh PK, Srivastava A, Singh P, Singh D, Dalela D, Goel M, Gupta S, Negi MPS, Bhatt M., Rath SK (2011). Dagnostic and prognostic potential of CK20 gene expression in patients with transitional-cell carcinoma of the urinary bladder. EJC supplements 9 :14-15
Srivastava AK, Singh PK, Singh P, Singh D, Bhatt MLB, Dalela D, Goel MM, Gupta S, Negi MPS, Rath SK (2011) Clinical experience with UCA1 as a biomarker for non-muscular invasive bladder cancer. Eur Urol Suppl 10(2):74.
Singh N, Nigam M, Ranjan V, Zaidi D, Garg VK, Sharma S, Chaturvedi R, Shankar R, Kumar S, Sharma R, Mitra K, Balapure AK, Rath SK (2011) Resveratrol as an adjunct therapy in cyclophosphamide-treated MCF-7 cells and breast tumor explants. Cancer Sci. 102(5):1059-1067
Mitra, A.K., Singh, N., Singh, A., Garg, V.K., Sharma, M., Rashmi Chaturvedi , R. and Rath, S.K. (2009) Stastically significant association of the single nucleotide polymorphism (SNP) rs 13181 (ERCC 2) with predisposition to Squamous Cell Carcinomas of the head and neck ( SCCHN) and Breast Cancer in the north Indian population J Exptl Clinical Cancer Research.28(1):104
Singh , S.K. and Rath, S.K. (2009) Effect of Gossypol Tetra-acetic Acid on the Reproductive Organs in Male Mice. Recent Advances in Medicinal Plants, Studium press LLC,Houston 25, 159-176
Singh,N. Nigam, M., Ranjan, V, Sharma,R.S., Balapure, A. and Rath, S.K. (2009): Caspase mediated enhanced apoptotic action of Cyclophosphamide and Resveratrol treated MCF-7 cells. Journal of pharmacological sciences , 109,(4), 473-485
Brahma M.K., Dohare, P, Varma, S., Rath, S.K., Garg, P., Biswal, P.K., Dhar Chowdhury, P. and Ray, M. (2008): The neuronal apoptotic death in global cerebral ischemia in gerbil: important role for sodium channel modulator. Journal of Neuroscience Research, 87 (6), 1400-1411
Singh A, Boldin-Adamsky S, Thimmulappa RK, Rath SK, Ashush H, Coulter J, Blackford A, Goodman SN, Bunz F, Watson WH, Gabrielson E, Feinstein E, Biswal S. (2008) RNAi-mediated silencing of nuclear factor erythroid-2-related factor 2 gene expression in non-small cell lung cancer inhibits tumor growth and increases efficacy of chemotherapy. Cancer Research : 68 (19):7975-7984
Noel,S. Sharma, S. and Rath, S.K. (2008).Simultaneous application of t-test and fold change criteria to identify acetaminophen and carbon tetrachloride affected genes in mice liver. Environmental Toxicology and Pharmacology 26(2):150-161
Mitra,A.K.,Singh, N., Singh, A., Garg, V.K., Agarwal, A. Sharma, M., Rashmi Chaturvedi , R. and Rath,S.K. (2008): Association of polymorphisms in Base Excision Repair genes with the risk of Breast Cancer: a case-control study in north Indian women. Oncology Research 17 (3):127-135
Sanjeev Noel, Sharad Sharma, Rishi Shankar and Srikanta Kumar Rath (2008). Identification of differentially expressed genes following acute exposure to Bulaquine (CDRI 80/53) in mice liver Basic and Clinical Pharmacology and Toxicology, 103 (6), 522-529
The Indian Genome Variation Consortium (2008) Genetic Landscape of the People of India: a Canvas for Disease Gene Exploration. J Genetics, 87 (1), 3-20
Neetu Singh, Amit Kumar Mitra, Vivek Kumar Garg, Amit Agarwal, Mandira Sharma, Rashmi Chaturvedi and Srikanta Kumar Rath. (2007) Association of CYP1A1 polymorphisms with Breast Cancer in North Indian women. Oncology Research 16 (12):587-597
Sanjeev Noel, Sharad Sharma, Rishi Shanker and Srikanta Kumar Rath (2007): Primaquine-induced differential gene expression analysis in mice liver using DNA microarrays. Toxicology: 239 (1-2):96-107.
Sharma, R.,Muttil, P.,Yadav, A.B., Rath,S.K. Bajpai, V.K., Mani, U and Misra, A. (2007): Uptake of inhalable microparticles affects defence responses of macrophages infected with Mycobacterium tuberculosis H37Ra. Journal of Antimicrobial Chemotherapy 59, 499–506
Singh, A., Chandra, S., Gupta, S.K., Chauhan, L.K.S., and Rath, S.K. (2007): Mutagenicity of Leachates from Industrial Solid Wastes using Salmonella Reverse Mutation Assay. Ecotoxicology and Environmental Safety 66:210-216
Noel, S. and Rath, S.K. (2006): Randomly amplified polymorphic DNA as a tool for genotoxicity: an assessment. Toxicology and Industrial Health, 22 (6):267-275
Noel, S., Kasinathan, M., and Rath, S.K. (2006): Evaluation of Apigenin using in vitro cytokinesis blocked micronucleus assay. Toxicology in Vitro, 20 (7), 1168-1172
The Indian Genome Variation database Consortium (2005): The Indian Genome Variation database (IGVdb): An overview, Human Genetics 118: 1-11
Singh, S.K., Rath, S.K. (1990): Histologic Changes in the Mouse Testis after treatment with Gossypol Tetra acetic acid. Archives of Histology and Cytology 53 (4): 393-396